System Status: RUNNING3CEM Client Democlient
SIMULATOR preview. Commands are audited by TakeLabControl and are not sent to Liberty Blue software or instrument hardware.

Zdalny dostęp do laboratoriów i syntezy peptydów

TakeLabControl łączy rezerwacje, płatności, planowanie metod i kontrolowany dostęp do aparatury laboratoryjnej. Dla Liberty Blue 2.0 obsługujemy wynajem syntezatora peptydów, Fmoc SPPS i pracę w przeglądarce.

zdalny dostęp do laboratoriumwynajem syntezatora peptydówsynteza peptydów Fmoc

Active Web Controls

Clickable API actions
Ready
Residue Pad35 aa / 9 unique
A D E G L P R S T
Sequence Paste Import
Parsed sequence previewwaiting for pasteUnsupported residue code check: waiting for paste.
Protected derivative previewnot detectedPaste a sequence containing S/T/D/E/R to preview common derivative checks.
Derivative assignment preview

Paste S/T/D/E/R residues to show derivative assignment checks; review reagent library before validation.

FASTA headers, spaces, numbers, and punctuation are ignored; the web draft is updated only after import.
Sequence Risk Analyzerneeds_review
Length35 aaSequence length is inside the normal planning range.
Hydrophobic Load20%No high hydrophobic load flag.
Cys / Pro0 C / 8 PReview protecting strategy and coupling behavior.
Residue CodescanonicalAll normalized letters are canonical amino acid codes.

Review resin, coupling cycle, microwave mode, and calculator outputs before locking the method draft.

Method Assembly Previewneeds_review
Customer SequenceRPRPESDTDDLLLLGPSSSTGGAPPPSDLLGPSPSNormalized N-to-C peptide sequence used by the web planner.
Assembly OrderSPSPGLLDSPPPAGGTSSSPGLLLLDDTDSEPRPRPlanning view shows C-to-N residue addition order for review.
Resin / ScaleRink Amide MBHA / 0.1 mmolResin and scale must match the operator-approved Liberty method setup.
Method Boundaryweb draft onlyNo Liberty Blue method file is created, imported, saved, or executed from this preview.

Resolve sequence or cycle review flags, then build the method review package.

Residue Step Table35 planned residue(s)
Seq PosResidueAdd StepDirection
1R35C-to-N
2P34C-to-N
3R33C-to-N
4P32C-to-N
5E31C-to-N
6S30C-to-N
7D29C-to-N
8T28C-to-N
9D27C-to-N
10D26C-to-N
11L25C-to-N
12L24C-to-N
13L23C-to-N
14L22C-to-N
15G21C-to-N
16P20C-to-N
17S19C-to-N
18S18C-to-N
19S17C-to-N
20T16C-to-N
21G15C-to-N
22G14C-to-N
23A13C-to-N
24P12C-to-N
Showing first 24 residues; full sequence remains in the draft.
Residue Demand Summary9 residue type(s)
ResidueCountShareStatusNote
P823%needs_reviewReview stock, derivative, or coupling assumptions before reagent estimate.
S720%needs_reviewReview stock, derivative, or coupling assumptions before reagent estimate.
L617%readyReady for reagent and usage estimate.
D411%readyReady for reagent and usage estimate.
G411%readyReady for reagent and usage estimate.
R26%readyReady for reagent and usage estimate.
T26%readyReady for reagent and usage estimate.
A13%readyReady for reagent and usage estimate.
E13%readyReady for reagent and usage estimate.
Scale & Resin Planner0.1 mmol / Rink Amide MBHA
Scale
Resin
Cycle
Microwave
Resin Loading Previewready
0.1 mmoltarget scaleoperator-selected planning scale
loading basis0.64 mmol/g default; validate before reagent calculator use
156.3 mgestimated resin massRink Amide MBHA

Planning estimate only; validate against the reagent calculator and local operator setup before any Liberty Blue method work.

Cycle Schedule Previewneeds_review
Residue Additions35One planned residue addition per canonical sequence position.
Coupling Passes35Single coupling pass per residue.
Deprotection Passes34Planning estimate for between-addition deprotection handling.
Wash Blocks70Coarse wash planning count for usage and bottle review.

Review schedule intensity against sequence flags before calculator and bottle setup checks.

Cycle & Microwave Plannerneeds_review
Coupling StrategyStandardStandard cycle selected for normal planning.
Microwave ModeStandard HE-SPPS couplingStandard microwave planning selected.
Sequence Alignmentneeds_reviewSequence analyzer raised flags; cycle choice should justify the handling strategy.
Execution Boundaryplanning onlyThis planner does not write a Liberty Blue method or execute microwave, pump, prime, purge, run, or hardware actions.

Sequence flags need review; compare cycle intensity and microwave mode before locking the draft.

Method Readiness Workflow1/8 ready
Draftneeds_reviewResolve sequence or cycle review flags, then build the method review package.
Validationneeds_review35 aa / blockers 0 / warnings 2
Review Packageblockedblockers 1 / warnings 10
Reagentsready5 rows / resin 156.3 mg
Usageneeds_review1399.3 ml / low 2 / missing 2
Bottlesblockedlow 2 / missing 2
Equipmentneeds_reviewready 4 / review 3 / blocked 0
Locknot_mappedWaiting for an explicit Lock Draft click.

Run Readiness Workflow refreshes planning, calculator, bottle, and equipment checks without writing a Liberty Blue method or touching hardware.

Method Review PackageBPC157_100mg35 aa / 0.1 mmol
blockedblockers 1warnings 10bottles 2+2equipment 3

Resolve validation, bottle, and equipment blockers before locking the method draft for operator review.

Validationneeds_review / 35 aaS(tBu), D(OtBu), E(OtBu)
Reagents5 rows / resin 156.3 mg5 bottle requirements
Usage1399.3 ml / 177515.3 mg35 coupling / 105 wash
Bottlesblocked / refill yeslow 2 / missing 2
Equipmentneeds_reviewready 4 / review 3
Boundaryplanning onlyNo Liberty Blue method is created, imported, saved, selected, or modified by this preview.
Planning OutputsLive method, calculator, bottle, and equipment state
Method Validation35 aa / needs_reviewwarnings 2 / blockers 0
Reagent Calculatorresin 156.3 mg / 5 rows5 bottle requirements / AA 0.2 M
Usage Calculator1399.3 ml liquid / 177515.3 mg solidlow 2 / missing 2 / refill yes
Bottle Setupblocked / 7 itemsready 3 / review 0 / low 2 / missing 2
Equipment Readinessneeds_review / 7 itemsready 4 / review 3 / blocked 0
Calculator Detail Tablesactive draft estimates
Reagent Detail5 rows
Fmoc-Ser(tBu)-OHcurrent amino acid191.7Current coupling residue; verify derivative choice against the Liberty Blue reagent library.
HBTUactivator185.8Activator estimate follows method-scale planning and must be checked against the selected cycle.
DIPEAbase129.3Base volume is concentration-driven; confirm stock concentration before preparation.
Piperidinedeprotection--Bulk deprotection solution usage belongs to the usage calculator and bottle sufficiency check.
DMFwash / solvent--Bulk solvent usage is sequence/cycle dependent and remains a simulator estimate.
Usage Detail6 rows
Protected amino acid poolamino acid87.5Review or refill before approving this method setup.
HBTUactivator34.3Bottle appears sufficient for this simulator method estimate.
DIPEAbase17.5Bottle appears sufficient for this simulator method estimate.
Piperidinedeprotection280Review or refill before approving this method setup.
DMFwash solvent980Review or refill before approving this method setup.
Bottle Detail7 items
Fmoc-Ser(tBu)-OHbottle 659.9%Review during bottle setup, then lock assignment for this method draft.
HBTUbottle 2241.8%Bottle appears sufficient for this simulator method estimate.
DIPEAbottle 2368.1%Bottle appears sufficient for this simulator method estimate.
Piperidinebottle 240%Review or refill before approving this method setup.
DMFbottle 250%Review or refill before approving this method setup.
Bottle Fill Plannerready 3 / review 0 / blocked 4
BottleReagentLevelUseProjectedAction
6Fmoc-Ser(tBu)-OH62%2.5 ml59.9%Review during bottle setup, then lock assignment for this method draft.
22HBTU71%34.3 ml41.8%Bottle appears sufficient for this simulator method estimate.
23DIPEA83%17.5 ml68.1%Bottle appears sufficient for this simulator method estimate.
24Piperidine67%280 ml0%Review or refill before approving this method setup.
25DMF78%980 ml0%Review or refill before approving this method setup.
unmappedProtected amino acid pool--87.5 ml--Review or refill before approving this method setup.
unmappedRink Amide MBHA------Review or refill before approving this method setup.

Resolve missing or low bottle rows before operator handoff.

Equipment Setup Plannerready 4 / review 3 / blocked 0 / unmapped 0
Windows Agent heartbeatneeds_reviewagent-rdp-cem-windows on cem-win-lab-01; heartbeat 2790198s ago.Refresh the Windows Agent before any navigation pilot or active-control package.
Liberty Blue windowreadyLiberty Blue 2.0 mapped on Liberty Blue 2.0 active window.Use read-only navigation pilots to map Methods, Synthesis, Results, Calculators, Bottle Setup, and Diagnostics.
Liberty Blue software versionreadyVersion 4.14.8496.27211.Keep the version attached to method packages and audit evidence.
Instrument connection boundaryneeds_reviewlatest_ui_map: Fluidics Not connected; Microwave Not connected; PRIME Pumps Not connected; UV Spectrometer Not connected; Pressure 0.00 PSI; Temperature 0 °C.Keep this as a supervised safety gate; web checks do not replace physical verification before diagnostics or run control.
Read-only UI automation preflightready2 evidence item(s); no preflight blockers.Prepare the next exact read-only navigation package for a single screen.
Maintenance and calibration planningneeds_review6 maintenance/calibration topic(s): Backflush positions, RV drain test, Timed Addition Calibration.Mirror these topics as operator planning/status screens; do not run diagnostics, calibration, pumps, microwave, prime, or purge from this readiness check.
Command channel boundaryreadyLatest agent evidence reports no Liberty Blue command channel opened.Continue using explicit command contracts and audited approvals before any Liberty Blue software action.

Use Equipment Check together with Bottle Check and Method Draft Lock before any supervised Liberty Blue navigation or setup workflow.

Diagnostics & Maintenance Plannerready 0 / review 5 / blocked 0 / approvals 5
source Liberty Blue 2.0 active windowui map agent-ui-map-1782457840215-59observation not attached
Diagnostics screen mappingdiagnostics / needs_review
Latest UI map agent-ui-map-1782457840215-59 observed Liberty Blue 2.0 active window.
  • Prepare exactly one read-only navigation pilot for Diagnostics.
  • Capture labels, status indicators, and disabled/enabled state only.
  • Stop before any test, prime, purge, pump, microwave, or confirmation dialog.
separate approval required
Maintenance remindersmaintenance / needs_review
Backflush positions; RV drain test; Timed Addition Calibration; Solvent filters; Waste sensor performance
  • Review local Liberty Blue reminder: Backflush positions.
  • Review local Liberty Blue reminder: RV drain test.
  • Review local Liberty Blue reminder: Timed Addition Calibration.
separate approval required
Calibration planningcalibration / needs_review
Timed Addition Calibration
  • Treat calibration as status/planning only in the web dashboard.
  • Require local operator evidence before any calibration-related action is proposed.
  • Do not run calibration, pumps, microwave, prime, purge, or diagnostics from this planner.
separate approval required
Settings and notification boundaryconfiguration / needs_review
Top menu includes Settings; prior discovery noted system and notification settings as read-only candidates.
  • Inventory setting labels only.
  • Do not save settings, transmit credentials, or alter notification configuration.
  • Record any production credential requirement as a separate implementation task.
separate approval required
Instrument safety gatesafety_gate / needs_review
latest_ui_map: Fluidics Not connected; Microwave Not connected; PRIME Pumps Not connected; UV Spectrometer Not connected; Pressure 0.00 PSI; Temperature 0 °C.
  • Keep physical connection status as a local operator gate.
  • Require current disconnected/safe evidence for any future state-changing pilot.
  • Do not present web STOP as a physical emergency stop.
separate approval required

Use this planner as the operator checklist for diagnostics, calibration, maintenance, and settings parity.

It does not connect to Liberty Blue, click controls, run diagnostics, change calibration, perform maintenance, start pumps, use microwave, prime, purge, or affect hardware.
Results & Reports Plannerready 2 / review 4 / blocked 0 / deliverables 6
results Results History Shapeui map agent-ui-map-1782457840215-59audit events 52
Current run result recordrun_result / needs_review
run-sim-bpc157-001 / BPC157_100mg / RUNNING / progress 42%.Customer-visible run result summary with method, peptide, scale, status, stage, and timestamps.

Keep result record as in-progress; final report waits for completed run/result evidence.

Results screen shaperun_result / ready
Results History Shape: Grouped by date and time; selecting a result reveals run details.Date-grouped Results browser mirrored in TakeLabControl.

Use read-only Results navigation to refine result row labels and report metadata.

Method review packagemethod_package / needs_review
No persistent method draft lock has been created in the current simulator ledger.Locked method draft JSON, validation summary, calculator outputs, bottle/equipment readiness, and operator handoff text.

Lock a review-ready draft before final customer report handoff.

Audit trail exportaudit_trail / ready
52 simulator audit event(s); latest agent.dry_run_result.focus_window_executed.Append-only audit event export for booking, payment, session actions, method review, and control-plane requests.

Persist audit events durably before production launch; current preview export remains simulator memory.

Export bundle scopeexport_bundle / needs_review
File menu and Help topics mention export/import and troubleshooting bundle; exact report file scope is not yet controlled.Scoped customer bundle: report summary, method package, audit export, selected screenshots/evidence, and operator notes.

Define an operator-approved export bundle contract before any file read/export from the Windows station.

Customer delivery readinesscustomer_delivery / needs_review
Booking/login/payment readiness exists; final customer delivery still needs durable storage and reviewed report package.Customer portal delivery area for report downloads, audit receipt, invoice/payment state, and Method Vault transfer notes.

Wire report package to LB2 customer session after durable storage and access policy are implemented.

Resolve report deliverable gaps before final customer handoff or any run-control pilot.

It does not read files from the Windows station, export Liberty Blue files, click Results/File menus, write reports to Liberty Blue, or affect hardware.
Locked Method Draftnot locked
No locked method draft yetClick Lock Draft after validation/review to freeze the current web draft for operator review.
Persistent Lock Ledger0 locked draft(s)

No persistent method draft locks have been returned by the backend yet.

Operator Handoff Summary
review blockers before lock
Method readinessblocked35 aa / blockers 1 / warnings 10
Bottle readinessblockedready 3 / low 2 / missing 2
Equipment readinessneeds_reviewready 4 / review 3 / blocked 0
Diagnostics readinessneeds_reviewtopics 5 / approval gates 5
Results readinessneeds_reviewdeliverables 6 / audit 52
Handoff locknot lockedClick Lock Draft after review is acceptable.
Handoff Text Preview
TakeLabControl CEM method handoff
Method: BPC157_100mg
Peptide: BPC 157
Sequence: RPRPESDTDDLLLLGPSSSTGGAPPPSDLLGPSPS
Scale: 0.1 mmol
Resin: Rink Amide MBHA
Cycle: Standard
Microwave: Standard HE-SPPS coupling
Review status: blocked
Bottle status: blocked
Equipment status: needs_review
Diagnostics/maintenance status: needs_review
Results/report status: needs_review
Lock status: not locked
Lock id: none
Boundary: planning handoff only; no Liberty Blue method was written and no hardware action was executed.
Draft JSON Import
Imports planning state into the web draft only; validation, calculators, bottles, and equipment checks must be rerun.
Operator Review Queuemethod-review-preview-current / blocked
SequenceRPRPESDTDDLLLLGPSSSTGGAPPPSDLLGPSPSBuild the web method draft editor from Liberty Methods terminology.
Method builderManual sections identify Liberty Methods create/edit/copy/import/report workflows; Methods tab has been mapped read-only.Add web method draft editor with sequence import, validation, cycle selection, and method report preview.
Cycle and microwave methodsEditors menu exposes Cycles and Microwave methods, but detailed screens have not been dynamically mapped.Perform read-only navigation mapping for Editors > Cycles and Editors > Microwave methods.
Reagent libraryManual and observed UI identify Reagent Library and derivative management as first-class workflows.Add reagent metadata model, derivative fields, and controlled delete/add gating.
Reagent Bottle 6Fmoc-Ser(tBu)-OH / 62%Review during bottle setup, then lock assignment for this method draft.
Reagent Bottle 22HBTU / 71%Review during bottle setup, then lock assignment for this method draft.
Reagent Bottle 23DIPEA / 83%Review during bottle setup, then lock assignment for this method draft.
Piperidinebottle 24 / projected 0%Review or refill before approving this method setup.
DMFbottle 25 / projected 0%Review or refill before approving this method setup.
Protected amino acid poolbottle not mapped / projected unknown%Review or refill before approving this method setup.
Windows Agent heartbeatagent-rdp-cem-windows on cem-win-lab-01; heartbeat 2790198s ago.Refresh the Windows Agent before any navigation pilot or active-control package.
Instrument connection boundarylatest_ui_map: Fluidics Not connected; Microwave Not connected; PRIME Pumps Not connected; UV Spectrometer Not connected; Pressure 0.00 PSI; Temperature 0 °C.Keep this as a supervised safety gate; web checks do not replace physical verification before diagnostics or run control.
Maintenance and calibration planning6 maintenance/calibration topic(s): Backflush positions, RV drain test, Timed Addition Calibration.Mirror these topics as operator planning/status screens; do not run diagnostics, calibration, pumps, microwave, prime, or purge from this readiness check.
ReadyClick a control to call the live TakeLabControl API.

Booking window

activeJul 28, 01:43 PM - Jul 28, 06:13 PMbooking-sim-20260624-001

Payment gate

paidOperator approval requiredCommands stay simulator-only after approval

Allowed commands

3READ_STATUS, EXPORT_REPORT, REQUEST_REFILLHigh-impact commands remain blocked for this client role
Controlled commands require operator approval before simulator queueing.Ready

Method

BPC157_100mgLoaded

Peptide

BPC 15735 aa / 4147.6 Da

Resin

Rink Amide MBHA0.64 mmol/g

Scale

0.10 mmolsimulator batch

Current Run Progress

Step 7 of 35

Coupling - Fmoc-Ser(tBu)-OH

DDeprotection
WWash
CCoupling
WWash
MMicrowave
Microwave HeatingTemperature: 75 CPower: 45 W

Elapsed Time

01:24:18

Estimated Remaining

04:12:47

Estimated Finish

Today, 15:42

Sequence (35 AA)

RPRPEDSTDDLLLLGPSSSTGGAPPPSDLLGPSPS
CompletedIn ProgressUpcomingCurrent AA: S(tBu)
#AACycleStepStatusTemp (C)TimeReagents
5EStandardMicrowaveCompleted7505:00DMF, DIPEA
6PStandardWashCompleted--01:30DMF
7S(tBu)StandardMicrowaveIn Progress7505:00Ser(tBu)-OH, HBTU, DIPEA
8DStandardDeprotectionPending--06:00Piperidine, DMF
9S(tBu)StandardWashPending--01:30DMF

Reagent Bottles (27 Positions)

1Fmoc-Gly-OH82%
2Fmoc-Ala-OH65%
3Fmoc-Val-OH71%
4Fmoc-Leu-OH80%
5Fmoc-Ile-OH52%
6Fmoc-Ser(tBu)-OH62%
7Fmoc-Thr(tBu)-OH74%
8Fmoc-Cys(Trt)-OH91%
9Fmoc-Met-OH67%
10Fmoc-Asn(Trt)-OH88%
11Fmoc-Gln(Trt)-OH60%
12Fmoc-Asp(OtBu)-OH70%
13Fmoc-Glu(OtBu)-OH56%
14Fmoc-Phe-OH66%
15Fmoc-Tyr(tBu)-OH77%
16Fmoc-Trp(Boc)-OH64%
17Fmoc-Lys(Boc)-OH55%
18Fmoc-Arg(Pbf)-OH63%
19Fmoc-His(Trt)-OH68%
20Fmoc-Pro-OH75%
21Fmoc-D-Pro-OH90%
22HBTU71%
23DIPEA83%
24Piperidine67%
25DMF78%
26NMP72%
27DMSO85%
> 60%20% - 60%< 20%Empty

Run History (Recent)

Date / TimeMethodPeptideScaleStatusReport
2026-06-23 14:32BPC157_100mgBPC 1570.10 mmolCompletedPDF
2026-06-22 09:15TB500_50mgTB-5000.05 mmolCompletedPDF
2026-06-21 16:45Semax_30mgSemax0.03 mmolCompletedPDF
2026-06-20 11:07CJC1295_100mgCJC-12950.10 mmolCompletedPDF
2026-06-19 13:22MelanotanII_50mgMelanotan II0.05 mmolCompletedPDF

Simulator Command Queue

Agent lease contract
CommandStatusSafetyExpiresAgent
READ_STATUSrun-sim-bpc157-001queuedlowJul 26, 08:42 PMwaiting

Operator Approval Requests

Simulator gate
RequestStatusExpiresSafetyAction
No pending operator approvals. Controlled commands stay out of the simulator queue until approval exists.
No operator approval action submitted

Command Safety Policy

simulator_only
2 allowed1 approval3 blocked
CommandDecisionGatesReason
READ_STATUSlowallowedno confirm / sessionStatus reads are allowed for the active paid simulator booking and do not touch Liberty Blue.
EXPORT_REPORTlowallowedno confirm / sessionReport export is modeled as simulator data only until a scoped export path is approved.
REQUEST_REFILLcontrolledrequires_operator_approvalconfirm / operatorRefill requests require simulator confirmation and local operator handling; no remote refill action is executed.
START_RUNhigh_impactblockedconfirm / operatorStarting synthesis is blocked for client simulator sessions and requires a future approved integration safety plan.
PAUSE_RUNhigh_impactblockedconfirm / operatorPause is a critical run-control path and remains blocked outside a separately approved supervised pilot.
STOP_RUNhigh_impactblockedconfirm / operatorStop is safety-critical and must not imply emergency-stop capability from the web dashboard.

Focus Pilot Readiness

FOCUS_LIBERTY_BLUE_WINDOW
Focus Liberty Blue window without clicking controlscem-win-lab-01 / Liberty Blue 2.0
preflight readyresult: focus_recorded

Focus-only pilot result is recorded. Prepare a separate one-action software-only pilot approval before START/PAUSE/STOP.

preflightfocus resultsoftware pilot gateapproval: APPROVE READ-ONLY DRY RUN
EvidenceUI map agent-ui-map-1782457840215-59 recorded for Liberty Blue 2.0 active window.120 UI element(s) mapped; 49 allowed for dry-run.
ForbiddenSTART_RUNPAUSE_RUNSTOP_RUNresumeprimepurge
separate transfer approvalseparate execution approvallocal operatorfocus only

Transfer Channel

Focus pilot handoff
RDPopenSMBrequires temporary drop folderTarget192.168.188.102Mac allowlist192.168.188.106
Windows drop
C:\TakeLabControl\Inbound
SMB share
smb://192.168.188.102/TakeLabControlDrop
Refresh
pnpm cem:focus-transfer-refresh
Status
pnpm cem:transfer-channel-status

Run the temporary SMB setup in elevated PowerShell over RDP, then refresh the focus transfer package immediately before transfer.

transfer-only channelno execution approvalno Liberty Blue clickno START/PAUSE/STOP

Read-Only Evidence Intake Packet

observation / UI map contract
Statuswaiting_for_supervised_evidenceapprovals 0
Agentstale2790502s / threshold 900s
Latest evidenceLiberty Blue 2.0 active windowagent-ui-map-1782457840215-59

Read-only Evidence Intake Packet converts the recovery gate into an operator submission checklist for fresh observation/UI-map evidence; it is not an execution approval and does not create navigation work.

Read-only observation report/v1/cem/agent/observations
observation

Refresh Liberty Blue window, component, sensor, maintenance-attention, integration-surface, and disconnected-instrument evidence without opening a command channel.

Required fields
  • agentId, instrumentId, stationHostname, capturedAt, and mode=read_only_discovery.
  • libertyBlueWindowTitle, libertyBlueSoftwareVersion, and observedScreen.
  • components, sensors, maintenanceAttention, integrationSurfaces, and operatorNotes.
Safety flags
instrumentDisconnected must reflect the supervised local evidence.noHardwareChannel=truenoCommandChannel=truenoStateChangingActions=true
No action log indicating PowerShell/RDP automation, UI clicking, typing, file copy, diagnostics, maintenance, setup edit, export, or START/PAUSE/STOP.
Read-only UI map report/v1/cem/agent/ui-map
ui_map

Refresh visible Liberty Blue screen labels, menu/tab structure, enabled states, and risk classification for screen parity without clicking controls.

Required fields
  • agentId, instrumentId, stationHostname, capturedAt, and mode=read_only_ui_map.
  • libertyBlueWindowTitle, libertyBlueSoftwareVersion, observedScreen, elements, blockedActions, and operatorNotes.
  • Each element includes label, controlType, automationId, path, enabled, visible, riskClass, allowedForDryRun, and notes.
Safety flags
instrumentDisconnected must reflect the supervised local evidence.noHardwareChannel=truenoCommandChannel=truenoStateChangingActions=truenoClicksPerformed=true
No element marked allowedForDryRun=true when its riskClass is controlled, high_impact, or unknown.
Operator checklist
  1. Confirm a local operator is supervising the Liberty Blue 2.0 station before accepting a payload.
  2. Confirm the payload is an observation or UI map only and uses the accepted endpoint shown in this packet.
  3. Confirm all required safety flags are present and true except instrumentDisconnected, which must match local evidence.
  4. Confirm the operator note states no START/PAUSE/STOP, setup, diagnostics, maintenance, export, command, or hardware action was attempted.
Accepted evidence
  1. Fresh observation report id or UI map report id.
  2. Observed Liberty Blue screen title and visible labels.
  3. Safety flags proving no hardware channel, no command channel, and no state-changing actions.
Forbidden
Do not start the Windows Agent from this packet.Do not open RDP, run PowerShell, click Liberty Blue, type keys, change screens, save methods, change reagents or bottle setup, run diagnostics, run maintenance, export files, START/PAUSE/STOP synthesis, or affect hardware.
JSON evidence intake packet
Accept only a fresh supervised read-only observation or UI map payload; do not create navigation packages from stale evidence.Fetching this packet does not connect to Windows, start the Windows Agent, open RDP, click Liberty Blue, submit evidence, create navigation requests, create packages, execute diagnostics, execute maintenance, export files, start/pause/stop synthesis, or affect hardware.Web STOP is not a physical emergency stop and this packet does not approve run-control.

Software Pilot Plans

Final-stage controls

START / PAUSE / STOP stay behind method design, calculators, reagent setup, configuration checks, and result/audit parity.

START_RUNliberty_blue_software_only
draft_requires_exact_approvaldisconnected required

Liberty Blue software may attempt to enter a run-start workflow, show a disconnected-instrument warning, or reject start because no instrument is connected.

PAUSE_RUNliberty_blue_software_only
draft_requires_exact_approvaldisconnected required

Liberty Blue software may reject pause when no run is active, or show that the control is unavailable in the disconnected/software-only state.

STOP_RUNliberty_blue_software_only
draft_requires_exact_approvaldisconnected required

Liberty Blue software may reject stop when no run is active, or show that the control is unavailable in the disconnected/software-only state.

focus dry-runlocal operatorone actionno hardware

Liberty Workflow Parity

Before run control
Method draftBPC157_100mgBPC 157 / 0.10 mmol
References601485.pdf601488.pdf / 601850.pdf
Sequence validation35 aaA, D, E, G, L, P, R, S, Tneeds_review
Protected residuesS(tBu), D(OtBu), E(OtBu)Protected derivatives must be verified against the reagent library before loading.
Sequence length35 aa
Scale0.10 mmol
Estimated peptide mass4147.6 Da
Primary solventsDMF / Piperidine / DIPEA
1
Method builderManual sections identify Liberty Methods create/edit/copy/import/report workflows; Methods tab has been mapped read-only.

Add web method draft editor with sequence import, validation, cycle selection, and method report preview.

needs_review
2
Cycle and microwave methodsEditors menu exposes Cycles and Microwave methods, but detailed screens have not been dynamically mapped.

Perform read-only navigation mapping for Editors > Cycles and Editors > Microwave methods.

not_mapped
3
Reagent libraryManual and observed UI identify Reagent Library and derivative management as first-class workflows.

Add reagent metadata model, derivative fields, and controlled delete/add gating.

needs_review
4
Bottle setup readinessDashboard already models 27 positions and level readiness; fluidic diagram reference was located.

Link bottles to method/reagent calculator requirements and refill approval workflow.

ready
5
Configuration, diagnostics, calibrationHome screen shows maintenance attention; remote maintenance/calibration execution is high impact.

Display status and local checklists only until a separate high-impact pilot exists.

blocked
6
Results, reports, audit trailResults screen, method/run reports, export/import, and audit report sections are documented.

Build result browser, report export queue, and audit trail filters before final run control.

needs_review
Ready to validate method draft
Locked Drafts0 review item(s)

No method draft has been locked for operator review yet.

Reagent Calculatorreadymass, solution volume, bottle assignment warning, operator preparation note
Usage Calculatorreadyestimated reagent usage, solvent usage, bottle sufficiency, refill readiness
0.10 mmolscale35 aasequence156.3 mgresin estimate0.2 MAA stock
RoleReagentEqmmolMassVolumeBottle
current amino acidFmoc-Ser(tBu)-OH50.5191.7 mg2.5 mL#6 / 62%
activatorHBTU4.90.49185.8 mg0.98 mL#22 / 71%
baseDIPEA101129.3 mg0.5 mL#23 / 83%
deprotectionPiperidine--0.1----#24 / 67%
wash / solventDMF--0.1----#25 / 78%

This is an original TakeLabControl simulator estimate, not a copied Liberty Blue calculator output.

Estimate was generated from the default simulator method workspace.

1399.3 mLliquids177515.3 mgsolids35couplingsReviewrefill gate
CategoryReagentUse mLUse mgBottleProjected
amino acidProtected amino acid pool87.5 mL67095 mglocalmissing
activatorHBTU34.3 mL65026.5 mg#2241.8%
baseDIPEA17.5 mL45237.5 mg#2368.1%
deprotectionPiperidine280 mL--#240%
wash solventDMF980 mL--#250%
resinRink Amide MBHA--156.3 mglocalmissing

This usage calculator is an original TakeLabControl simulator estimate, not a copied Liberty Blue calculation.

Estimate was generated from the default simulator method workspace.

Sequence validatedSequence is present and residue count matches the dashboard mockup.
needs_review

Add sequence parser with protected-residue annotations and import validation.

Resin and scale selectedRink Amide MBHA and 0.10 mmol are present in the simulator draft.
ready

Connect resin loading and substitution checks to calculator output.

Bottle setup sufficientBottle levels are modeled, but method-specific consumption is not yet calculated.
needs_review

Compare usage estimate against bottle levels and low/empty thresholds.

Maintenance attention reviewedObserved Liberty Blue maintenance reminders include multiple Change now items.
blocked

Show local-operator checklist before allowing final run-control pilots.

Security Readiness

simulator_only
3 ready3 simulator2 configure1 blocked
Liberty Blue integration modebackend
ready

API refuses every mode except simulator.

Keep LIBERTY_BLUE_INTEGRATION_MODE=simulator until a signed integration safety plan exists.
Public backend surfacebackend
ready

Nginx exposes /cem and the same-origin command proxy; internal /v1/cem routes stay private.

Keep preview smoke tests checking that internal endpoints are not exposed publicly.
Customer authenticationfrontend
simulator_only

Current dashboard uses a demo client session and no production identity provider.

Integrate production auth with organization roles before accepting external customers.
Payment and booking entitlementpayments
simulator_only

Booking ledger is simulator data and Stripe is not connected to production webhooks.

Connect Stripe test mode, webhook signature checks, and paid booking windows before production.
Command policy gatesbackend
ready

READ_STATUS and EXPORT_REPORT are allowed; REQUEST_REFILL requires confirmation, idempotency keys, and operator approval before queueing; queued and leased commands expire before stale agent action; START/PAUSE/STOP are blocked.

Build an operator approval workflow before any controlled pilot.
Windows Agent channelagent
simulator_only

Agent heartbeat and observation endpoints accept simulator/read-only payloads only.

Build an outbound-only Windows service with machine identity and read-only discovery first.
Real Liberty Blue controloperations
blocked

No official API/SDK path or lab SOP has been approved for remote execution.

Do not enable START/PAUSE/STOP or method import until CEM-supported integration and lab safety approval are documented.
Durable audit retentionbackend
needs_configuration

Preview audit events are in-memory simulator data.

Persist audit events to PostgreSQL with append-only semantics and exportable reports.
Secrets handlingoperations
needs_configuration

Preview uses environment variables on the Scaleway host; no managed secret rotation is configured.

Move production secrets to a managed vault or sealed deployment process with rotation runbooks.

Audit Trail

Latest simulator events
  1. agent.dry_run_result.focus_window_executedagent-rdp-cem-windows - agent-rdp-cem-windows reported focus_window_executed for package dry-run-package-1782390445187-80; performedOperation=focus_window.
  2. agent.dry_run_result.focus_window_executedagent-rdp-cem-windows - agent-rdp-cem-windows reported focus_window_executed for package dry-run-package-1782390445187-80; performedOperation=focus_window.
  3. agent.ui_map.recordedWindows Agent UI mapper - agent-rdp-cem-windows reported 120 UI element(s) from Liberty Blue 2.0 active window; no clicks, command channel, hardware channel, or state-changing action was opened.
  4. lb2.booking.rejected_conflictCEM Client Demo - user-client-demo requested 2026-06-26T07:14:34.919Z - 2026-06-26T08:14:34.987Z, but it overlaps booking-sim-20260624-001.
  5. lb2.payment.checkout_session_rejectedTakeLabControl Payments - Checkout simulator rejected unknown booking id booking-does-not-exist.

Agent Heartbeat

2790198s ago
Station
cem-win-lab-01
Mode
simulator
Software
read-only discovery pending
read_only_ui_mapui_element_inventoryno_real_liberty_blue_channelno_command_channelno_clicks_performed

Last Read-Only Agent Observation

read_only_discovery
Observed screen
Current Synthesis
Station
cem-win-lab-01
Software
4.14.8496.27211
FluidicsNot connectedMicrowaveNot connectedWasteOKSpillDry
instrumentDisconnectednoHardwareChannelnoCommandChannelnoStateChangingActions

Booking & Payment Ledger

Simulator-only readiness
Auth: database_accountPayments: stripe_live_gatedProduction auth: configuredProduction payments: not configured
ReservedPrivate bookingreserved-window-1
activeJul 08, 08:16 AM - Jul 08, 12:46 PMsimulator_only
paid0 PLNstripe_checkout
approvedREAD_STATUSliberty-blue-2-cem-001
ReservedPrivate bookingreserved-window-2
pending_paymentDec 30, 02:58 PM - Dec 30, 03:00 PMsimulator_only
requires_payment0 USDstripe_checkout
requiredREAD_STATUSliberty-blue-2-cem-001
ReservedPrivate bookingreserved-window-3
pending_paymentAug 01, 12:18 AM - Aug 01, 12:20 AMsimulator_only
requires_payment0 USDstripe_checkout
requiredREAD_STATUSliberty-blue-2-cem-001
ReservedPrivate bookingreserved-window-4
pending_paymentAug 01, 01:54 AM - Aug 01, 01:56 AMsimulator_only
requires_payment0 USDstripe_checkout
requiredREAD_STATUSliberty-blue-2-cem-001
ReservedPrivate bookingreserved-window-5
pending_paymentAug 01, 07:33 PM - Aug 01, 07:35 PMsimulator_only
requires_payment0 USDstripe_checkout
requiredREAD_STATUSliberty-blue-2-cem-001
ReservedPrivate bookingreserved-window-6
pending_paymentAug 02, 12:30 AM - Aug 02, 12:32 AMsimulator_only
requires_payment0 USDstripe_checkout
requiredREAD_STATUSliberty-blue-2-cem-001
ReservedPrivate bookingreserved-window-7
pending_paymentAug 02, 03:42 AM - Aug 02, 03:44 AMsimulator_only
requires_payment0 USDstripe_checkout
requiredREAD_STATUSliberty-blue-2-cem-001
ReservedPrivate bookingreserved-window-8
pending_paymentAug 02, 05:51 AM - Aug 02, 05:53 AMsimulator_only
requires_payment0 USDstripe_checkout
requiredREAD_STATUSliberty-blue-2-cem-001
ReservedPrivate bookingreserved-window-9
pending_paymentAug 02, 07:21 AM - Aug 02, 07:23 AMsimulator_only
requires_payment0 USDstripe_checkout
requiredREAD_STATUSliberty-blue-2-cem-001
ReservedPrivate bookingreserved-window-10
pending_paymentJan 15, 09:00 AM - Jan 16, 09:00 AMsimulator_only
requires_payment0 USDstripe_checkout
requiredREAD_STATUSliberty-blue-2-cem-001

Read-Only Liberty Blue Discovery

Observed via RDP, no control channel

Documentation & UI Source Ledger

4 source(s)
Operation Manual601485.pdf76 pages

Safety, Liberty Methods, cycles, microwave methods, reports

Use headings and terminology to finish web-native method builder parity.
User Guide601488.pdf10 pages

Operator overview, basic chemistry workflow, high-level setup flow

Convert into TakeLabControl checklists and onboarding copy.
Fluidic Diagram601850.pdflocal PDF

Bottle positions, reagent routing, setup readiness

Cross-check bottle setup and usage calculator requirements.
Observed UI Mapagent-ui-map-1782457840215-59120 elements

Visible tabs, controls, risk classes, blocked actions

Prepare one read-only navigation package per unmapped screen.

TakeLabControl uses local Liberty Blue source structure and labels to build original operator workflows; manual text is not reproduced.

Observed UI Map Evidence

agent-ui-map-1782457840215-59
UI map reportagent-ui-map-1782457840215-59Latest read-only UIAutomation element map accepted by the backend.
Discovery sourcerdp_observationCaptured Jun 24, 11:04 AM.
Observed windowLiberty Blue 2.0Liberty Blue 2.0 active window on cem-win-lab-01.
Software version4.14.8496.27211Liberty Blue 2.0 / Automated Microwave Peptide Synthesizer.
Component channelFluidics: Not connected / Microwave: Not connectedRead-only observation; no command or hardware channel opened.
Allowed mappingHome, Methods, Synthesis, Results, Upgrades, About, HelpNavigation pilots still require one exact approval and result capture.
UI map element count120 elements49 read-only/navigation element(s) marked dry-run safe.
Risk class summaryro 49 / nav 12 / ctrl 23 / high 27Controlled and high-impact elements remain blocked from dry-run automation.
Mapped tab inventoryHome, Methods, Synthesis, Results, Help, About, UpgradesVisible Liberty Blue tabs found by read-only UIAutomation.
Blocked action inventorystart_run, pause_run, stop_run, prime, purge, calibrationBlocked actions are not exposed as unattended web controls.

Screen Parity Queue

4/6 mapped
MethodsreadyMethod library, method editor, copy/import reviewText / The Usage Calculator calculates the reagent amounts required to run one or more Liberty Methods. Calculate usage for an / high_impactMirror this screen in the web workflow before any write/import pilot.
SynthesisreadyRun queue, synthesis setup, final-stage run controlsText / A Post-Synthesis Step is a set of instructions to perform after the main Liberty Method is complete, such as running a c / high_impactMirror this screen in the web workflow before any write/import pilot.
ResultsreadyResult history, reports, audit handoffTabItem / Results / navigationMirror this screen in the web workflow before any write/import pilot.
CalculatorsreadyReagent and usage calculatorsMenuItem / Tools / navigationMirror this screen in the web workflow before any write/import pilot.
Bottle Setupnot_mappedBottle/reagent assignment reviewNot found in the current UI map or baseline discovery.Prepare one read-only navigation pilot package for this exact screen.
Diagnosticsneeds_reviewDiagnostics, maintenance, calibration planningMenuItem / Service / navigationKeep exact-action approval required before any navigation or setup action.

Liberty Methods

Open screen: method library. Center prompt: select a method to edit.

HomeMethodsSynthesisResultsUpgradesAboutHelp
FileEditorsSettingsTools
CEM / ACPCEM / 1/16CEM / 3CEM / 1/16 0.2x2MONIKA / SpinProtMONIKA / New Method

Components and Sensors

Fluidics
Not connected
Microwave
Not connected
Temperature
0 C
Waste
OK
Spill
Dry
RV Overflow
Dry

Local Maintenance Attention

  • Backflush positionsChange now
  • RV drain testChange now
  • Timed Addition CalibrationChange now
  • Solvent filtersChange now
  • Waste sensor performanceChange now
  • Yearly preventative maintenanceChange now

Current Synthesis Screen

Run controls are visible but disabled while components are not connected.

Current SynthesisRV vesselReagent AssignmentsAll Methods queueSchedule bottle refill disabledRun controls disabled

Results History Shape

Grouped by date and time; selecting a result reveals run details.

2023-10-28 / 1/16 0.2x22023-10-27 / 1/16 0.2x22023-10-21 / 1/16 0.22023-10-10 / 176-191 0.12023-10-02 / ACP2023-04-13 / ACP

Help and Software Metadata

Application version
4.14.8496.27211
Build
4/6/2023 4:07:02 PM
Runtime
.NET 4.8
Cycle count
111
Regulator firmware
0
Operation ManualUser GuideFluidic DiagramGuided TourTroubleshooting BundleAudit Trail topicExport and Import topicSMTP Server topic

Integration Surface Map

Import, editor, settings, troubleshooting, and method-library changes require separate approval.

File
Export, Import, vessel camera snapshots
Editors
Cycles, Microwave methods, Reagents
Settings
System settings, Notification settings, Color themes
Help
Audit Trail, SMTP Server, Troubleshooting Bundle
Tools
No visible items captured in this pass